SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900022
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:11786079-11809686
Size: 23607
Super-enhancer rank 22
Number of SE elements: 5
ChIP density(Case|Control): 92891.1843|4664.7432
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MTHFR ;
ROSE Overlap CLCN6 ; MTHFR ;
ROSE Proximal NPPA ; AGTRAP ; NPPB ;
ROSE Closest MTHFR ;
Lasso ;
PreSTIGE ;
ABC AGTRAP ;
BETA LOC102724659 ; CLCN6 ; MTHFR ; NPPB ; C1orf167 ; NPPA ; NPPA-AS1 ; AGTRAP ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900022 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers