SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_003900020
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr3:45041104-45144904
Size: 103800
Super-enhancer rank 20
Number of SE elements: 21
ChIP density(Case|Control): 108387.96|18237.66
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDCP1;
ROSE Overlap CDCP1;
ROSE Proximal CLEC3B;
ROSE Closest CDCP1;
Lasso CDCP1; EXOSC7; TE158; ZDHHC3;
PreSTIGE CDCP1; EXOSC7; TE158;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers