SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900014
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:31733140-31740830
Size: 7690
Super-enhancer rank 14
Number of SE elements: 1
ChIP density(Case|Control): 101782.533|2709.187
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLIC1 ;
ROSE Overlap CLIC1 ; MSH5 ;
ROSE Proximal BAT5 ; C6orf26 ; LY6G6C ; DDAH2 ; C6orf25 ; LY6G6D ; LY6G6F ; MSH5 ; LY6G6E ; C6orf27 ;
ROSE Closest CLIC1 ;
Lasso ;
PreSTIGE ;
ABC SAPCD1-AS1 ; SAPCD1 ;
BETA C6orf25 ; SNORD48 ; LY6G5B ; ABHD16A ; CLIC1 ; BAG6 ; DDAH2 ; HSPA1B ; SAPCD1-AS1 ; C6orf48 ; APOM ; GPANK1 ; VARS ; LY6G6C ; MSH5 ; LY6G6E ; MIR4646 ; CSNK2B ; LSM2 ; HSPA1A ; HSPA1L ; LY6G6F ; MSH5-SAPCD1 ; VWA7 ; LY6G6D ; LY6G5C ; SAPCD1 ; C6orf47 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900014 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers