SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900008
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:43623622-43640924
Size: 17302
Super-enhancer rank 8
Number of SE elements: 2
ChIP density(Case|Control): 128105.7382|2949.991
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAD2L1BP ;
ROSE Overlap MAD2L1BP ; GTPBP2 ;
ROSE Proximal XPO5 ; RSPH9 ; POLH ; MRPS18A ;
ROSE Closest MAD2L1BP ;
Lasso LRRC73 ; VEGFA ; YIPF3 ;
PreSTIGE GTPBP2 ; AD2L1BP ; RPS18A ; POLH ; XPO5 ;
ABC ;
BETA MRPS18A ; POLH ; GTPBP2 ; RSPH9 ; MAD2L1BP ; XPO5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900008 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers