SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900002
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr20:47304360-47393405
Size: 89045
Super-enhancer rank 2
Number of SE elements: 20
ChIP density(Case|Control): 173967.2165|10578.546
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZMYND8 ;
ROSE Overlap ZMYND8 ; LOC100131496 ;
ROSE Proximal ZMYND8 ;
ROSE Closest ZMYND8 ;
Lasso NCOA3 ; ZYND8 ;
PreSTIGE ;
ABC ;
BETA ZMYND8 ; LOC100131496 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers