SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_003800085
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Liver
Biosample name: HepG2
Genomic region: chr3:49687588-49692032
Size: 4444
Super-enhancer rank 85
Number of SE elements: 1
ChIP density(Case|Control): 90924.6844|1559.3996
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF123;
ROSE Overlap RNF123; MST1;
ROSE Proximal GMPPB; AMIGO3; APEH;
ROSE Closest RNF123;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003800085 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers