SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400353
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr12:31730737-31764263
Size: 33526
Super-enhancer rank 353
Number of SE elements: 5
ChIP density(Case|Control): 30652.8218|2732.369
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AMN1 ;
ROSE Overlap ;
ROSE Proximal AMN1 ; H3F3C ;
ROSE Closest AMN1 ;
Lasso ;
PreSTIGE ;
ABC DENND5B-AS1 ; DENND5B ;
BETA AMN1 ; METTL20 ; H3F3C ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400353 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers