SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400350
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr19:48632225-48639518
Size: 7293
Super-enhancer rank 350
Number of SE elements: 1
ChIP density(Case|Control): 28645.4454|568.854
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DBP ;
ROSE Overlap CA11 ; SEC1 ; DBP ;
ROSE Proximal RPL18 ; SPHK2 ; FAM83E ; NTN5 ; SPACA4 ;
ROSE Closest DBP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SULT2B1 ; FUT2 ; SPHK2 ; SPACA4 ; CA11 ; RPL18 ; DBP ; FAM83E ; MAMSTR ; SEC1P ; NTN5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400350 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers