SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400349
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr16:89556866-89566735
Size: 9869
Super-enhancer rank 349
Number of SE elements: 1
ChIP density(Case|Control): 29514.2314|1381.66
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD68 ;
ROSE Overlap RPL13 ; SNORD68 ; SPG7 ;
ROSE Proximal DPEP1 ; CPNE7 ;
ROSE Closest SNORD68 ;
Lasso ;
PreSTIGE ;
ABC ANKRD11 ;
BETA RPL13 ; CPNE7 ; ANKRD11 ; SPATA33 ; SPG7 ; CHMP1A ; DPEP1 ; SNORD68 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400349 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers