SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400342
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr20:62349087-62367433
Size: 18346
Super-enhancer rank 342
Number of SE elements: 4
ChIP density(Case|Control): 29516.8794|1078.7448
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LAMA5 ;
ROSE Overlap LAMA5 ;
ROSE Proximal RPS21 ; ADRM1 ; CABLES2 ;
ROSE Closest LAMA5 ;
Lasso ;
PreSTIGE ;
ABC LIME1 ;
BETA LAMA5-AS1 ; MIR4758 ; LAMA5 ; RBBP8NL ; ADRM1 ; CABLES2 ; RPS21 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400342 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers