SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400339
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr1:36372916-36402837
Size: 29921
Super-enhancer rank 339
Number of SE elements: 3
ChIP density(Case|Control): 30914.3772|2181.2409
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: STK40 ;
ROSE Overlap LSM10 ; STK40 ;
ROSE Proximal OSCP1 ; FAM176B ;
ROSE Closest STK40 ;
Lasso ;
PreSTIGE ;
ABC AGO3 ;
BETA OSCP1 ; EVA1B ; STK40 ; SH3D21 ; CSF3R ; LSM10 ; MRPS15 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400339 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers