SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400322
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr3:98511502-98524091
Size: 12589
Super-enhancer rank 322
Number of SE elements: 1
ChIP density(Case|Control): 32974.3677|2895.47
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDND1 ;
ROSE Overlap CLDND1 ;
ROSE Proximal OR5K1 ; OR5K2 ; GPR15 ;
ROSE Closest CLDND1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CPOX ; CLDND1 ; OR5K2 ; GPR15 ; OR5K1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400322 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers