SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400320
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr19:36127291-36142228
Size: 14937
Super-enhancer rank 320
Number of SE elements: 4
ChIP density(Case|Control): 31484.2086|1235.2899
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CAPNS1 ;
ROSE Overlap CAPNS1 ;
ROSE Proximal CAPNS1 ; POLR2I ; TBCB ; COX7A1 ;
ROSE Closest CAPNS1 ;
Lasso ;
PreSTIGE ;
ABC HAUS5 ; RBM42 ; ETV2 ; COX6B1 ; UPK1A-AS1 ; TMEM147-AS1 ; TMEM147 ;
BETA CAPNS1 ; TBCB ; ZNF146 ; COX7A1 ; POLR2I ; OVOL3 ; ZNF565 ; WDR62 ; THAP8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400320 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers