SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400308
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr20:50534302-50543202
Size: 8900
Super-enhancer rank 308
Number of SE elements: 2
ChIP density(Case|Control): 31682.22|965.65
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTPN1 ;
ROSE Overlap PTPN1 ;
ROSE Proximal MIR645 ;
ROSE Closest PTPN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM65C ; PTPN1 ; MIR1302-5 ; MIR645 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400308 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers