SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400304
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr6:42098794-42143396
Size: 44602
Super-enhancer rank 304
Number of SE elements: 7
ChIP density(Case|Control): 34124.9902|3184.5828
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C6ORF132 ;
ROSE Overlap C6orf132 ;
ROSE Proximal TAF8 ; CCND3 ; GUCA1A ;
ROSE Closest C6orf132 ;
Lasso ;
PreSTIGE ;
ABC PRICKLE4 ; TOMM6 ; TRERF1 ; UBR2 ; USP49 ; TAF8 ; CCND3 ; BYSL ; MED20 ; MDFI ; TFEB ; MRPS10 ; FRS3 ; C6orf132 ; FOXP4-AS1 ;
BETA C6orf132 ; GUCA1B ; CCND3 ; GUCA1A ; TAF8 ; MRPS10 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400304 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers