SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400297
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr17:28806408-28813947
Size: 7539
Super-enhancer rank 297
Number of SE elements: 1
ChIP density(Case|Control): 32200.5768|885.0786
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C17ORF63 ;
ROSE Overlap C17orf63 ;
ROSE Proximal MIR144 ; ERAL1 ; C17orf63 ; MIR451 ;
ROSE Closest C17orf63 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PROCA1 ; TRAF4 ; SNORD42A ; MIR451A ; NEK8 ; RAB34 ; FAM222B ; MIR4732 ; SNORD4B ; SNORD4A ; DHRS13 ; RPL23A ; SNORD42B ; TLCD1 ; FLOT2 ; ERAL1 ; NARR ; MIR451B ; MIR144 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400297 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers