SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400295
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr10:70557904-70581023
Size: 23119
Super-enhancer rank 295
Number of SE elements: 3
ChIP density(Case|Control): 33922.5087|2267.9739
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRF1 ;
ROSE Overlap KIAA1274 ;
ROSE Proximal PRF1 ;
ROSE Closest PRF1 ;
Lasso ;
PreSTIGE ;
ABC DDX50 ; STOX1 ;
BETA PALD1 ; PRF1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400295 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers