SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003400292
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr7:55127141-55135275
Size: 8134
Super-enhancer rank 292
Number of SE elements: 2
ChIP density(Case|Control): 32932.1258|1011.8696
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EGFR ;
ROSE Overlap EGFR ;
ROSE Proximal ;
ROSE Closest EGFR ;
Lasso ;
PreSTIGE ;
ABC PHKG1 ; CHCHD2 ; SUMF2 ; PSPH ; CCT6A ; LOC100996654 ; SEC61G ; GBAS ; MRPS17 ; ZNF713 ; VOPP1 ; LANCL2 ; ELDR ; EGFR ;
BETA EGFR-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400292 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers