SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400290
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr19:1165389-1190398
Size: 25009
Super-enhancer rank 290
Number of SE elements: 6
ChIP density(Case|Control): 33419.5267|1440.5184
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SBNO2 ;
ROSE Overlap SBNO2 ;
ROSE Proximal STK11 ; C19orf26 ; SBNO2 ;
ROSE Closest SBNO2 ;
Lasso ;
PreSTIGE ;
ABC SBNO2 ; STK11 ;
BETA GPX4 ; C19orf26 ; CIRBP ; ATP5D ; CIRBP-AS1 ; POLR2E ; C19orf24 ; STK11 ; SBNO2 ; MIDN ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400290 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers