SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400272
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr1:15832548-15851181
Size: 18633
Super-enhancer rank 272
Number of SE elements: 2
ChIP density(Case|Control): 34597.7544|1136.613
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPEN ;
ROSE Overlap SPEN ; FLJ37453 ;
ROSE Proximal UQCRHL ;
ROSE Closest SPEN ;
Lasso ;
PreSTIGE ;
ABC DNAJC16 ; CASP9 ;
BETA UQCRHL ; FBLIM1 ; FLJ37453 ; TMEM82 ; MIR5096 ; SPEN ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400272 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers