SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400257
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr19:2028328-2062768
Size: 34440
Super-enhancer rank 257
Number of SE elements: 8
ChIP density(Case|Control): 36785.364|1976.856
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MKNK2 ;
ROSE Overlap MKNK2 ;
ROSE Proximal MOBKL2A ; BTBD2 ; IZUMO4 ;
ROSE Closest MKNK2 ;
Lasso ;
PreSTIGE ;
ABC BTBD2 ; IZUMO4 ; MOB3A ; MKNK2 ; CSNK1G2 ; ADAT3 ; SCAMP4 ;
BETA MKNK2 ; BTBD2 ; MOB3A ; IZUMO4 ; CSNK1G2-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400257 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers