SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400249
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr11:64237849-64248678
Size: 10829
Super-enhancer rank 249
Number of SE elements: 2
ChIP density(Case|Control): 36946.3822|1028.755
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FKBP2 ;
ROSE Overlap FKBP2 ; VEGFB ; PPP1R14B ;
ROSE Proximal BAD ; DNAJC4 ; PLCB3 ; NUDT22 ; FERMT3 ; KCNK4 ; GPR137 ; TRPT1 ;
ROSE Closest FKBP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRPT1 ; NUDT22 ; ESRRA ; GPR137 ; BAD ; VEGFB ; PRDX5 ; KCNK4 ; TRMT112 ; STIP1 ; CCDC88B ; FERMT3 ; FKBP2 ; DNAJC4 ; MACROD1 ; MIR7155 ; PLCB3 ; PPP1R14B ; TEX40 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400249 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers