SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400243
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr10:4660381-4705390
Size: 45009
Super-enhancer rank 243
Number of SE elements: 6
ChIP density(Case|Control): 41264.2512|4815.963
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100216001 ;
ROSE Overlap LOC338588 ; LOC100216001 ;
ROSE Proximal ;
ROSE Closest LOC100216001 ;
Lasso ;
PreSTIGE ;
ABC PITRM1-AS1 ; KLF6 ; ASB13 ; LOC105376382 ; NET1 ; TUBAL3 ; AKR1C3 ; AKR1E2 ; LINC00702 ; LINC00704 ;
BETA LINC00704 ; LINC00705 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400243 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers