SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400236
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr8:38995230-39005456
Size: 10226
Super-enhancer rank 236
Number of SE elements: 1
ChIP density(Case|Control): 38294.3248|1110.5436
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ADAM9 ;
ROSE Overlap ADAM9 ; TM2D2 ;
ROSE Proximal ADAM9 ; TM2D2 ; HTRA4 ;
ROSE Closest ADAM9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TM2D2 ; ADAM9 ; PLEKHA2 ; HTRA4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400236 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers