SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400227
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr2:177240548-177266150
Size: 25602
Super-enhancer rank 227
Number of SE elements: 3
ChIP density(Case|Control): 40241.2236|2683.0896
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3128 ;
ROSE Overlap NFE2L2 ; MIR3128 ;
ROSE Proximal HNRNPA3 ; NFE2L2 ;
ROSE Closest MIR3128 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NFE2L2 ; HNRNPA3 ; MIR3128 ; MIR4444-1 ; MIR4444-2 ; MIR6512 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400227 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers