SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400215
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr17:75869194-75890396
Size: 21202
Super-enhancer rank 215
Number of SE elements: 3
ChIP density(Case|Control): 40690.8784|2113.8394
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRIM47 ;
ROSE Overlap TRIM47 ; TRIM65 ;
ROSE Proximal UNC13D ; WBP2 ; MRPL38 ;
ROSE Closest TRIM47 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UNK ; TEN1 ; WBP2 ; MRPL38 ; TRIM65 ; MIR4738 ; UNC13D ; TRIM47 ; FBF1 ; ACOX1 ; TEN1-CDK3 ; H3F3B ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400215 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers