SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400212
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr10:43394861-43421616
Size: 26755
Super-enhancer rank 212
Number of SE elements: 2
ChIP density(Case|Control): 41036.819|1899.605
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPF ;
ROSE Overlap HNRNPF ;
ROSE Proximal FXYD4 ; ZNF487P ;
ROSE Closest HNRNPF ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HNRNPF ; FXYD4 ; ZNF487 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400212 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers