SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400211
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr1:156744727-156753291
Size: 8564
Super-enhancer rank 211
Number of SE elements: 1
ChIP density(Case|Control): 40556.5348|1185.2576
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HDGF ;
ROSE Overlap HDGF ;
ROSE Proximal C1orf66 ; PRCC ; ISG20L2 ; MRPL24 ; CRABP2 ;
ROSE Closest HDGF ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RRNAD1 ; SH2D2A ; MRPL24 ; HDGF ; CRABP2 ; ISG20L2 ; NES ; NTRK1 ; PRCC ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400211 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers