SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400188
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr12:46547212-46558643
Size: 11431
Super-enhancer rank 188
Number of SE elements: 1
ChIP density(Case|Control): 44257.4027|1729.5103
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC38A2 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest SLC38A2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400188 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers