SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400184
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr19:12765645-12797108
Size: 31463
Super-enhancer rank 184
Number of SE elements: 5
ChIP density(Case|Control): 45574.1555|2120.6062
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOOK2 ;
ROSE Overlap JUNB ; HOOK2 ; PRDX2 ;
ROSE Proximal ASNA1 ; RNASEH2A ; RTBDN ; TNPO2 ; C19orf43 ; MAST1 ; BEST2 ;
ROSE Closest HOOK2 ;
Lasso ;
PreSTIGE ;
ABC DHPS ; WDR83OS ;
BETA RTBDN ; RNASEH2A ; MIR6794 ; DHPS ; TNPO2 ; C19orf43 ; FBXW9 ; PRDX2 ; MIR5684 ; HOOK2 ; MAST1 ; SNORD41 ; JUNB ; BEST2 ; ASNA1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400184 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers