SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400166
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr1:26989565-27013910
Size: 24345
Super-enhancer rank 166
Number of SE elements: 2
ChIP density(Case|Control): 49364.3565|2076.6285
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRNP1 ;
ROSE Overlap TRNP1 ; FAM46B ;
ROSE Proximal C1orf172 ;
ROSE Closest TRNP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRNP1 ; KDF1 ; FAM46B ; NR0B2 ; NUDC ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400166 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers