SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400164
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr7:5417565-5430622
Size: 13057
Super-enhancer rank 164
Number of SE elements: 1
ChIP density(Case|Control): 48419.2731|1070.674
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNRC18 ;
ROSE Overlap TNRC18 ;
ROSE Proximal ;
ROSE Closest TNRC18 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR589 ; FBXL18 ; TNRC18 ; LOC221946 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400164 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers