SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400161
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr2:231701513-231715801
Size: 14288
Super-enhancer rank 161
Number of SE elements: 3
ChIP density(Case|Control): 49205.0144|1140.1824
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTMA ;
ROSE Overlap MIR1244-1 ; PTMA ;
ROSE Proximal PTMA ; MIR1244-2 ;
ROSE Closest PTMA ;
Lasso ;
PreSTIGE ;
ABC ITM2C ;
BETA COPS7B ; MIR1244-1 ; MIR1244-3 ; PDE6D ; MIR1244-4 ; PTMA ; MIR1244-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400161 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers