SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400153
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr11:67345354-67381401
Size: 36047
Super-enhancer rank 153
Number of SE elements: 7
ChIP density(Case|Control): 51788.7249|3215.3924
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: POLD4 ;
ROSE Overlap LOC100130987 ; CLCF1 ; POLD4 ;
ROSE Proximal PPP1CA ; RAD9A ; TBC1D10C ; SSH3 ; CARNS1 ; RPS6KB2 ;
ROSE Closest POLD4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ADRBK1 ; CABP4 ; POLD4 ; CARNS1 ; GPR152 ; ANKRD13D ; TBC1D10C ; RAD9A ; PTPRCAP ; CLCF1 ; CORO1B ; PPP1CA ; RPS6KB2 ; LOC100130987 ; SSH3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400153 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers