SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003400150
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr12:53344645-53388799
Size: 44154
Super-enhancer rank 150
Number of SE elements: 6
ChIP density(Case|Control): 52282.7514|2697.8094
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SP1 ;
ROSE Overlap SP1 ;
ROSE Proximal SP7 ; PFDN5 ; AAAS ; AMHR2 ; C12orf10 ;
ROSE Closest SP1 ;
Lasso ;
PreSTIGE ;
ABC KRT8 ; KRT18 ; EIF4B ;
BETA PCBP2 ; AMHR2 ; SP1 ; PCBP2-OT1 ; SP7 ; AAAS ; PFDN5 ; PRR13 ; C12orf10 ; ESPL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400150 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers