SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003400145
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr17:41518682-41531370
Size: 12688
Super-enhancer rank 145
Number of SE elements: 1
ChIP density(Case|Control): 51753.0832|1426.1312
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT19 ;
ROSE Overlap KRT15 ; KRT19 ;
ROSE Proximal KRT35 ; KRT36 ; KRT9 ; KRT13 ;
ROSE Closest KRT19 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KRT19 ; KRT16 ; KRT32 ; KRT14 ; KRT9 ; MIR6510 ; KRT13 ; LINC00974 ; KRT38 ; KRT17 ; KRT15 ; KRT35 ; KRT36 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400145 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers