SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400140
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr17:75674396-75724101
Size: 49705
Super-enhancer rank 140
Number of SE elements: 7
ChIP density(Case|Control): 57916.266|6521.296
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITGB4 ;
ROSE Overlap SAP30BP ; ITGB4 ;
ROSE Proximal GALK1 ; RECQL5 ; LOC643008 ; LOC100130933 ; ITGB4 ;
ROSE Closest ITGB4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UNK ; SAP30BP ; ITGB4 ; MIR4738 ; SMIM5 ; SMIM6 ; RECQL5 ; H3F3B ; GALK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400140 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers