SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400139
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr17:17811315-17850597
Size: 39282
Super-enhancer rank 139
Number of SE elements: 5
ChIP density(Case|Control): 54613.7646|3048.2832
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SREBF1 ;
ROSE Overlap MIR33B ; SREBF1 ; TOM1L2 ; RAI1 ;
ROSE Proximal SMCR5 ;
ROSE Closest SREBF1 ;
Lasso ;
PreSTIGE ;
ABC DRG2 ; DRC3 ; TOM1L2 ; SMCR5 ; RAI1 ; SMCR2 ; ATPAF2 ; GID4 ; RASD1 ;
BETA MIR33B ; RAI1-AS1 ; SREBF1 ; MIR6777 ; SMCR5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400139 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers