SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003400124
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr9:21770476-21814261
Size: 43785
Super-enhancer rank 124
Number of SE elements: 7
ChIP density(Case|Control): 61535.439|5889.0825
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MTAP ;
ROSE Overlap MTAP ;
ROSE Proximal ;
ROSE Closest MTAP ;
Lasso ;
PreSTIGE ;
ABC CDKN2A ; KLHL9 ; MTAP ; MIR31HG ; CDKN2A-AS1 ; CDKN2B-AS1 ; FOCAD ; FOCAD-AS1 ; CDKN2B ;
BETA MTAP ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400124 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers