SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400109
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr12:6362167-6378325
Size: 16158
Super-enhancer rank 109
Number of SE elements: 2
ChIP density(Case|Control): 61574.9064|1504.3098
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCNN1A ;
ROSE Overlap SCNN1A ;
ROSE Proximal TNFRSF1A ; PLEKHG6 ; LTBR ;
ROSE Closest SCNN1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SCNN1A ; PLEKHG6 ; CD27-AS1 ; LTBR ; TNFRSF1A ; CD27 ; TAPBPL ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400109 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers