SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400104
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr20:31543965-31574918
Size: 30953
Super-enhancer rank 104
Number of SE elements: 6
ChIP density(Case|Control): 64103.663|3181.9684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PSIMCT-1 ;
ROSE Overlap HM13 ; PSIMCT-1 ;
ROSE Proximal HM13 ; ID1 ; MIR3193 ;
ROSE Closest PSIMCT-1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00028 ; ID1 ; HM13-AS1 ; MIR3193 ; DEFB124 ; HM13 ; COX4I2 ; REM1 ; MCTS2P ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400104 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers