SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400100
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr5:115895295-115941916
Size: 46621
Super-enhancer rank 100
Number of SE elements: 10
ChIP density(Case|Control): 69693.7329|8251.917
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AP3S1 ;
ROSE Overlap AP3S1 ;
ROSE Proximal AQPEP ;
ROSE Closest AQPEP ;
Lasso ;
PreSTIGE ;
ABC SEMA6A ;
BETA ATG12 ; LVRN ; AP3S1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400100 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers