SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400099
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr11:62538602-62575469
Size: 36867
Super-enhancer rank 99
Number of SE elements: 7
ChIP density(Case|Control): 64469.3229|3015.7206
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AHNAK ;
ROSE Overlap AHNAK ; EEF1G ; TUT1 ;
ROSE Proximal ROM1 ; MTA2 ; B3GAT3 ; EML3 ;
ROSE Closest AHNAK ;
Lasso ;
PreSTIGE ;
ABC TMEM179B ; TMEM223 ;
BETA MIR3654 ; B3GAT3 ; MTA2 ; AHNAK ; EML3 ; TUT1 ; MIR6747 ; GANAB ; ROM1 ; EEF1G ; INTS5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400099 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers