SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400095
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr6:34223149-34249513
Size: 26364
Super-enhancer rank 95
Number of SE elements: 4
ChIP density(Case|Control): 64789.53|2080.1196
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMGA1 ;
ROSE Overlap HMGA1 ; C6orf1 ;
ROSE Proximal C6orf1 ; HMGA1 ;
ROSE Closest HMGA1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GRM4 ; HMGA1 ; C6orf1 ; MIR6835 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400095 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers