SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400094
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr2:110096957-110117104
Size: 20147
Super-enhancer rank 94
Number of SE elements: 3
ChIP density(Case|Control): 66209.0861|2177.8907
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALL ;
ROSE Overlap MALL ;
ROSE Proximal MIR4267 ;
ROSE Closest MALL ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR4436B1 ; MIR4436B2 ; NPHP1 ; MALL ; MIR4267 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400094 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers