SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003400090
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr19:15823951-15839826
Size: 15875
Super-enhancer rank 90
Number of SE elements: 1
ChIP density(Case|Control): 67705.2875|1544.6375
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UCA1 ;
ROSE Overlap UCA1 ;
ROSE Proximal OR10H1 ; OR10H5 ; CYP4F24P ;
ROSE Closest UCA1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA OR10H5 ; UCA1 ; OR10H1 ; OR10H3 ; CYP4F2 ; LOC102724279 ; CYP4F24P ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400090 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers