SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400079
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr1:8153668-8213243
Size: 59575
Super-enhancer rank 79
Number of SE elements: 13
ChIP density(Case|Control): 77066.22|5141.3225
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ERRFI1 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest SLC45A1 ;
Lasso ;
PreSTIGE ;
ABC VAMP3 ; PARK7 ; ERRFI1 ; LINC01714 ; SLC45A1 ; LOC102724552 ;
BETA LOC102724539 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400079 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers