SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003400072
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr20:31590764-31612470
Size: 21706
Super-enhancer rank 72
Number of SE elements: 7
ChIP density(Case|Control): 78573.5494|1831.9864
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ID1 ;
ROSE Overlap ID1 ; MIR3193 ;
ROSE Proximal PSIMCT-1 ; COX4I2 ;
ROSE Closest ID1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ID1 ; HM13-AS1 ; MIR3193 ; HM13 ; COX4I2 ; MCTS2P ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400072 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers