SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400065
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr12:124904344-124941668
Size: 37324
Super-enhancer rank 65
Number of SE elements: 6
ChIP density(Case|Control): 83650.5488|3710.0056
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBC ;
ROSE Overlap UBC ;
ROSE Proximal SCARB1 ; DHX37 ;
ROSE Closest UBC ;
Lasso ;
PreSTIGE ;
ABC NCOR2 ;
BETA SCARB1 ; DHX37 ; UBC ; MIR5188 ; BRI3BP ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400065 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers