SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400052
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr8:125109935-125193944
Size: 84009
Super-enhancer rank 52
Number of SE elements: 9
ChIP density(Case|Control): 114336.249|16827.0027
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NSMCE2 ;
ROSE Overlap NSMCE2 ;
ROSE Proximal KIAA0196 ;
ROSE Closest NSMCE2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KIAA0196 ; NSMCE2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400052 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers